Well, i'll put a link to this topic on their issue tracker. Maybe they look into it - but i still don't think that's the issue.
https://github.com/fewizz/NotEnoughIDs/issues/74
As long as we can use 2655, we're fine. As a big amount of mods out there have coremods, they'll probably be there for a reason.
@DaemonUmbra
Yeah, but something must have changed, as the bug appears when updating forge 2655 to 2690 / 2703 and rollbacking to 2655 fixes it. Easy as that.