Nobody here is saying anything against mod managers as a whole, I am specifically speaking out against MCPatcher because last time I looked into it it patched in its own code NO MATTER if you have things selected or not. MCPatcher comes with a 'common utilities' section that is ALWAYS, and I do means ALWAYS injected when you merge a jar together.
If, as you claim, MCPatcher were just a archive utility when everything was disabled, I would have NO issue with it. But the plain facts of the matter is that it is not.
FML Doesn't private a api that breaks everyone else's. It follows the standard that is laid out by Minecraft. It is not our fault that people do not adhere to that standard.
Anyways now you're trying saying FML is loading mods that are not in the mods folder, thats a blaitent lie, you can look at the code and see that it is a lie. FML Loads things that are in the /mods/ folder and /coremods/ folder. You have a /mods1.2.5/ folder? FML doesnt give a flying fuck about it.
But if you have anything in the /mods/ folder you are stating that it is a mod and that it should be loaded as a mod.
I'm getting tired of your arragent stupidity, goodbye.